Extension:UcscIFrame

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UCSCIFrame

Release status: stable

Implementation Tag
Description Displays an <iframe/> for the UCSC Genome Browser
Author(s) Pierre Lindenbaum
Last version 1.0 (2010-08-06)
MediaWiki Tested on 1.16
License No license specified
Download see below

Check usage (experimental)

This Mediawiki extension displays a HTML <iframe/> to the UCSC Genome Browser

Contents

[edit] Screenshot

UcscIFrame.png

[edit] Source

The source is available here: http://code.google.com/p/code915/source/browse/trunk/mediawiki/extensions/ucsciframe/ucsciframe.php

[edit] Installation

Add...

require_once("$IP/extensions/ucsciframe/ucsciframe.php");

...to your LocalSettings.php file.

and copy the source to

  ${MWROOT}/extensions/ucsciframe/ucsciframe.php

[edit] Parameters

  • org default:Human
  • db default: hg18
  • chrom chromosome (required)
  • start start index (required)
  • end end index (required)
  • height default: 500px

[edit] Example

 <ucsciframe chrom="chr2" start="98987" end="9879899"/>

[edit] Reference

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