I have the same problem with ampersands and comma's on the new 1.27.0 version of Mediawiki, with Server 2008 and IIS 7.5.
I wrote a new rewrite rule that fixes all but the comma and ampersand. Any suggestions would be great.
<?xml version="1.0" encoding="UTF-8"?>
<configuration>
<system.webServer>
<rewrite>
<rules>
<clear />
<rule name="Pretty URL rewrite" enabled="true" stopProcessing="true">
<match url="^/?wiki/([^/]*)(/.*)?$" />
<conditions>
<add input="{REQUEST_FILENAME}" matchType="IsFile" negate="true" />
<add input="{REQUEST_FILENAME}" matchType="IsDirectory" negate="true" />
</conditions>
<action type="Rewrite" url="/index.php" logRewrittenUrl="true" />
<serverVariables>
<set name="REQUEST_URI" value="/wiki/{UrlEncode:{R:1}}{R:2}" />
</serverVariables>
</rule>
</rules>
</rewrite>
</system.webServer>
</configuration>