Extension:DNASeq

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DNASeq

Release status:Extension status stable

ImplementationTemplate:Extension#type Tag
DescriptionTemplate:Extension#description Displays a DNA Sequence
Author(s)Template:Extension#username Pierre Lindenbaum
Latest versionTemplate:Extension#version 1.0 (2009-01-04)
MediaWikiTemplate:Extension#mediawiki Tested on 1.13.3
LicenseTemplate:Extension#license No license specified
Download see below

Translate the DNASeq extension if it is available at translatewiki.net

Check usage and version matrix.

This Mediawiki extension enables you to display a DNA Sequence.

Screenshot[edit]

DNASeq Extention Tag.jpeg

Usage[edit]

<dnaseq>ATGACTGACAC ACTGATAGCTACGATCtagctagca N Y N N N tgctacgatgctagcatgctagctgac</dnaseq>

Source[edit]

The source is available here: http://code.google.com/p/lindenb/source/browse/trunk/proj/mediawiki/extensions/dnaseq/dnaseq.php

another version , proposed by Niklas Laxström

Installation[edit]

Add...

require_once("$IP/extensions/dnaseq/dnaseq.php");

...to your LocalSettings.php file.

and copy the source to $IP/extensions/dnaseq/dnaseq.php

Reference[edit]

To Do[edit]

CSS, base indexing, sending to blast...