Thread:Project:Support desk/SEF Urls with WIki in a subfolder

I had some doubts. I have a Wiki in a subfolder. I mean, my Wiki is mydomain.com/mediawiki. But in the root of the domain, there's another site. I was having doubts aobut friendly urls. I mean, even if I installed it in a subfolder the Wiki will create mydomain/wiki/Super_Mario. But this won't influence the site in the root, will it?