User:DanielRenfro

About
I am the premier developer for EcoliWiki at Texas A&M University. I try and work closely with the users to make the wiki as usable and informative as possible. If you have any questions or would like to provide any feedback, I would love to hear from you. My contact information is below, feel free to shoot me an email or call the lab.

I am involoved in the following research/projects:
 * EcoliWiki - the go-to source for all things Escherichia coli
 * SubtilisWiki - the wiki for Bacillus subtilis
 * GONUTS - a wiki for the Gene Ontology, including user-contributed documentation and annotations
 * PortEco - a next-generation resource for knowledge and data about the biology of Escherichia coli K-12 group strains
 * the Gene Ontology
 * GMOD
 * Inernational Society of Biocuration

Contact Info
2128 TAMU Bio/Bio Rm. 443 College Station, TX 77843-2128
 * [mailto:bluecurio@gmail.com bluecurio@gmail.com]
 * Dept. of Biochemistry and Biophysics, Texas A&M University
 * 979-862-4054

Publications

 * The Gene Ontology in 2010: extensions and refinements.
 * Gene Ontology Consortium.
 * Nucleic Acids Res. 2010 Jan;38(Database issue):D331-5. Epub 2009 Nov 17.
 * PMID: 19920128

Extensions

 * Extension:TableEdit
 * A pretty good attempt at a forms-based table-editor.
 * Allows users to edit tables dynamically using a GUI-type interface rather than learn wiki-syntax for tables. Made originally for the model-organism wiki about Escherichia coli, EcoliWiki.
 * Template-driven tables allow abstraction of table-definitions.


 * Extension:DataTables
 * An extension that takes advantage of the ResourceLoader to add Allan Jardine's jQuery extension datatables to MediaWiki.


 * Extension:GBrowseImage
 * An extension for the embedding of images from the open-source genome-browser Gbrowse.


 * Extension:ExtendedCategoryPage
 * working on documentation...